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RECOMB
2005
Springer
14 years 8 months ago
Pairwise Local Alignment of Protein Interaction Networks Guided by Models of Evolution
Abstract. With ever increasing amount of available data on protein-protein interaction (PPI) networks and research revealing that these networks evolve at a modular level, discover...
Mehmet Koyutürk, Ananth Grama, Wojciech Szpan...
ICALP
2009
Springer
14 years 8 months ago
Dynamic Succinct Ordered Trees
Abstract. We study the problem of maintaining a dynamic tree succinctly, in 2n + o(n) bits, under updates of the following form: insertion or deletion of a leaf, insertion of a nod...
Arash Farzan, J. Ian Munro
PPOPP
2010
ACM
14 years 5 months ago
GAMBIT: effective unit testing for concurrency libraries
As concurrent programming becomes prevalent, software providers are investing in concurrency libraries to improve programmer productivity. Concurrency libraries improve productivi...
Katherine E. Coons, Sebastian Burckhardt, Madanlal...
EUROSYS
2007
ACM
14 years 4 months ago
Melange: creating a "functional" internet
Most implementations of critical Internet protocols are written in type-unsafe languages such as C or C++ and are regularly vulnerable to serious security and reliability problems...
Anil Madhavapeddy, Alex Ho, Tim Deegan, David Scot...
ICCAD
2006
IEEE
177views Hardware» more  ICCAD 2006»
14 years 4 months ago
Application-specific customization of parameterized FPGA soft-core processors
Soft-core microprocessors mapped onto field-programmable gate arrays (FPGAs) represent an increasingly common embedded software implementation option. Modern FPGA soft-cores are p...
David Sheldon, Rakesh Kumar, Roman L. Lysecky, Fra...