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BIODATAMINING
2008
96views more  BIODATAMINING 2008»
13 years 10 months ago
Fast approximate hierarchical clustering using similarity heuristics
Background: Agglomerative hierarchical clustering (AHC) is a common unsupervised data analysis technique used in several biological applications. Standard AHC methods require that...
Meelis Kull, Jaak Vilo
BMCBI
2008
102views more  BMCBI 2008»
13 years 10 months ago
Ornithine decarboxylase antizyme finder (OAF): Fast and reliable detection of antizymes with frameshifts in mRNAs
Background: Ornithine decarboxylase antizymes are proteins which negatively regulate cellular polyamine levels via their affects on polyamine synthesis and cellular uptake. In vir...
Michaël Bekaert, Ivaylo P. Ivanov, John F. At...
IEEEPACT
2006
IEEE
14 years 3 months ago
An empirical evaluation of chains of recurrences for array dependence testing
Code restructuring compilers rely heavily on program analysis techniques to automatically detect data dependences between program statements. Dependences between statement instanc...
Johnnie Birch, Robert A. van Engelen, Kyle A. Gall...
ADC
2007
Springer
193views Database» more  ADC 2007»
14 years 4 months ago
Optimizing XPath Queries on Streaming XML Data
XML stream processing has recently become popular for many applications such as selective dissemination of information. Several approaches have been proposed and most of them are ...
Keerati Jittrawong, Raymond K. Wong
BMCBI
2007
226views more  BMCBI 2007»
13 years 10 months ago
MiRFinder: an improved approach and software implementation for genome-wide fast microRNA precursor scans
Background: MicroRNAs (miRNAs) are recognized as one of the most important families of noncoding RNAs that serve as important sequence-specific post-transcriptional regulators of ...
Ting-Hua Huang, Bin Fan, Max F. Rothschild, Zhi-Li...