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BMCBI
2005
94views more  BMCBI 2005»
13 years 9 months ago
YANA - a software tool for analyzing flux modes, gene-expression and enzyme activities
Background: A number of algorithms for steady state analysis of metabolic networks have been developed over the years. Of these, Elementary Mode Analysis (EMA) has proven especial...
Roland Schwarz, Patrick Musch, Axel von Kamp, Bern...
JBCB
2007
161views more  JBCB 2007»
13 years 9 months ago
On Cooperative Quasi-Equilibrium Models of transcriptional Regulation
Mechanistic models for transcriptional regulation are derived using the methods of equilibrium statistical mechanics, to model equilibrating processes that occur at a fast time sc...
Eric Mjolsness
BMCBI
2005
153views more  BMCBI 2005»
13 years 9 months ago
Mining published lists of cancer related microarray experiments: Identification of a gene expression signature having a critical
Background: Routine application of gene expression microarray technology is rapidly producing large amounts of data that necessitate new approaches of analysis. The analysis of a ...
Giacomo Finocchiaro, Francesco Mancuso, Heiko M&uu...
JCNS
2007
89views more  JCNS 2007»
13 years 9 months ago
Synchronous and asynchronous bursting states: role of intrinsic neural dynamics
Brain signals such as local field potentials often display gamma-band oscillations (30–70 Hz) in a variety of cognitive tasks. These oscillatory activities possibly reflect sy...
Takashi Takekawa, Toshio Aoyagi, Tomoki Fukai
TOG
2008
197views more  TOG 2008»
13 years 9 months ago
Two-way coupling of fluids to rigid and deformable solids and shells
We propose a novel solid/fluid coupling method that treats the coupled system in a fully implicit manner making it stable for arbitrary time steps, large density ratios, etc. In c...
Avi Robinson-Mosher, Tamar Shinar, Jon Gretarsson,...
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