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» Fast Protein Structure Alignment
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BMCBI
2006
165views more  BMCBI 2006»
15 years 2 months ago
Improving the quality of protein structure models by selecting from alignment alternatives
Background: In the area of protein structure prediction, recently a lot of effort has gone into the development of Model Quality Assessment Programs (MQAPs). MQAPs distinguish hig...
Ingolf Sommer, Stefano Toppo, Oliver Sander, Thoma...
72
Voted
APBC
2007
15 years 3 months ago
Protein Structure-Structure Alignment with Discrete Fr'echet Distance
Minghui Jiang, Ying Xu, Binhai Zhu
67
Voted
BIOINFORMATICS
2007
85views more  BIOINFORMATICS 2007»
15 years 2 months ago
A structural alignment kernel for protein structures
Jian Qiu, Martial Hue, Asa Ben-Hur, Jean-Philippe ...
151
Voted
ENGL
2008
121views more  ENGL 2008»
15 years 2 months ago
Prediction of Protein-Protein Interactions Using Pairwise Alignment and Inter-Domain Linker Region
One of the central problems in modern biology is to identify the complete set of interactions among the proteins in a cell. The structural interaction of proteins and their domains...
Nazar Zaki
145
Voted
BIBM
2010
IEEE
156views Bioinformatics» more  BIBM 2010»
15 years 7 days ago
Truncation of protein sequences for fast profile alignment with application to subcellular localization
We have recently found that the computation time of homology-based subcellular localization can be substantially reduced by aligning profiles up to the cleavage site positions of s...
Man-Wai Mak, Wei Wang, Sun-Yuan Kung