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» Fast Protein Structure Alignment
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BIOINFORMATICS
2006
73views more  BIOINFORMATICS 2006»
15 years 2 months ago
SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments
Yasuo Tabei, Koji Tsuda, Taishin Kin, Kiyoshi Asai
84
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TCBB
2010
104views more  TCBB 2010»
15 years 17 days ago
Fast Hinge Detection Algorithms for Flexible Protein Structures
— Analysis of conformational changes is one of the keys to the understanding of protein functions and interactions. For the analysis, we often compare two protein structures, tak...
Tetsuo Shibuya
136
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BMCBI
2007
128views more  BMCBI 2007»
15 years 2 months ago
A robust and efficient algorithm for the shape description of protein structures and its application in predicting ligand bindin
Background: An accurate description of protein shape derived from protein structure is necessary to establish an understanding of protein-ligand interactions, which in turn will l...
Lei Xie, Philip E. Bourne
BMCBI
2006
166views more  BMCBI 2006»
15 years 2 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
PR
2006
88views more  PR 2006»
15 years 2 months ago
A coprocessor architecture for fast protein structure prediction
Rahim Khoja, Mehul Marolia, Tinku Acharya, Chaital...