175 search results - page 18 / 35 » Fast Structured Motif Search in DNA Sequences |
SDM
2009
SIAM
14 years 4 months ago
2009
SIAM
Time series motifs are pairs of individual time series, or subsequences of a longer time series, which are very similar to each other. As with their discrete analogues in computat...
BMCBI
2010
13 years 7 months ago
2010
Background: Many protein interactions, especially those involved in signaling, involve short linear motifs consisting of 5-10 amino acid residues that interact with modular protei...
BMCBI
2002
13 years 7 months ago
2002
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
SAC
2010
ACM
13 years 7 months ago
2010
ACM
Next Generation Sequencing machines are generating millions of short DNA sequences (reads) everyday. There is a need for efficient algorithms to map these sequences to the referen...
ICSM
2007
IEEE
14 years 1 months ago
2007
IEEE
Bioinformaticists use the Basic Local Alignment Search Tool (BLAST) to characterize an unknown sequence by comparing it against a database of known sequences, thus detecting evolu...