175 search results - page 34 / 35 » Fast Structured Motif Search in DNA Sequences |
BMCBI
2005
13 years 7 months ago
2005
Background: The SH3 domain family is one of the most representative and widely studied cases of so-called Peptide Recognition Modules (PRM). The polyproline II motif PxxP that gen...
DASFAA
2005
IEEE
14 years 1 months ago
2005
IEEE
A novel approach for similarity search on the protein structure databases is proposed. PADS (Protein Alignment by Directional shape Signatures) incorporates the three dimensional ...
CC
2008
Springer
13 years 9 months ago
2008
Springer
Abstract. This paper introduces a method to generate efficient vectorized implementations of small stride permutations using only vector load and vector shuffle instructions. These...
23
Voted
ICCAD
2009
IEEE
13 years 5 months ago
2009
IEEE
Computational protein design can be formulated as an optimization problem, where the objective is to identify the sequence of amino acids that minimizes the energy of a given prot...
BMCBI
2008
13 years 7 months ago
2008
Background: A fundamental problem when trying to define the functional relationships between proteins is the difficulty in quantifying functional similarities, even when well-stru...