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» Filling the gap between biology and computer science
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RECOMB
2004
Springer
14 years 7 months ago
Computational identification of evolutionarily conserved exons
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...
Adam C. Siepel, David Haussler
ESANN
2008
13 years 9 months ago
Neural networks for computational neuroscience
Computational neuroscience is an appealing interdisciplinary domain, at the interface between biology and computer science. It aims at understanding the experimental data obtained...
David Meunier, Hélène Paugam-Moisy
DIS
2005
Springer
14 years 1 months ago
Exploring Predicate-Argument Relations for Named Entity Recognition in the Molecular Biology Domain
In this paper, the semantic relationships between a predicate and its arguments in terms of semantic roles are employed to improve lexical-based named entity recognition (NER) in t...
Tuangthong Wattarujeekrit, Nigel Collier
FM
2009
Springer
138views Formal Methods» more  FM 2009»
14 years 2 months ago
What Can Formal Methods Bring to Systems Biology?
This position paper argues that the operational modelling approaches from the formal methods community can be applied fruitfully within the systems biology domain. The results can ...
Nicola Bonzanni, K. Anton Feenstra, Wan Fokkink, E...
CORR
2010
Springer
88views Education» more  CORR 2010»
13 years 7 months ago
Grothendieck inequalities for semidefinite programs with rank constraint
Grothendieck inequalities are fundamental inequalities which are frequently used in many areas of mathematics and computer science. They can be interpreted as upper bounds for the ...
Jop Briët, Fernando Mário de Oliveira ...