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» Filling the gap between biology and computer science
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ATAL
2008
Springer
13 years 9 months ago
Tags and image scoring for robust cooperation
Establishing and maintaining cooperation is an enduring problem in multi-agent systems and, although several solutions exist, the increased use of online trading systems, peerto-p...
Nathan Griffiths
SAC
2009
ACM
14 years 2 months ago
On a discretizable subclass of instances of the molecular distance geometry problem
The molecular distance geometry problem can be formulated as the problem of finding an immersion in R3 of a given undirected, nonnegatively weighted graph G. In this paper, we di...
Carlile Lavor, Leo Liberti, Antonio Mucherino, Nel...
RECOMB
2004
Springer
14 years 7 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
PODC
2003
ACM
14 years 22 days ago
Geometric ad-hoc routing: of theory and practice
All too often a seemingly insurmountable divide between theory and practice can be witnessed. In this paper we try to contribute to narrowing this gap in the field of ad-hoc rout...
Fabian Kuhn, Roger Wattenhofer, Yan Zhang, Aaron Z...
BMCBI
2008
138views more  BMCBI 2008»
13 years 7 months ago
Using neural networks and evolutionary information in decoy discrimination for protein tertiary structure prediction
Background: We present a novel method of protein fold decoy discrimination using machine learning, more specifically using neural networks. Here, decoy discrimination is represent...
Ching-Wai Tan, David T. Jones