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BMCBI
2007
112views more  BMCBI 2007»
13 years 7 months ago
Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis
Background: Gene clustering has been widely used to group genes with similar expression pattern in microarray data analysis. Subsequent enrichment analysis using predefined gene s...
Tae-Min Kim, Yeun-Jun Chung, Mun-Gan Rhyu, Myeong ...
BMCBI
2005
104views more  BMCBI 2005»
13 years 7 months ago
An integrated approach of immunogenomics and bioinformatics to identify new Tumor Associated Antigens (TAA) for mammary cancer i
Background: Neoplastic transformation is a multistep process in which distinct gene products of specific cell regulatory pathways are involved at each stage. Identification of ove...
Federica Cavallo, Annalisa Astolfi, Manuela Iezzi,...
BMCBI
2007
121views more  BMCBI 2007»
13 years 7 months ago
A constrained polynomial regression procedure for estimating the local False Discovery Rate
Background: In the context of genomic association studies, for which a large number of statistical tests are performed simultaneously, the local False Discovery Rate (lFDR), which...
Cyril Dalmasso, Avner Bar-Hen, Philippe Broët
DATAMINE
2006
88views more  DATAMINE 2006»
13 years 7 months ago
Hyperclique pattern discovery
Existing algorithms for mining association patterns often rely on the support-based pruning strategy to prune a combinatorial search space. However, this strategy is not effective ...
Hui Xiong, Pang-Ning Tan, Vipin Kumar
CG
2007
Springer
13 years 7 months ago
A 2D-3D visualization support for human-centered rule mining
On account of the enormous amounts of rules that can be produced by data mining algorithms, knowledge post-processing is a difficult stage in an association rule discovery process....
Julien Blanchard, Bruno Pinaud, Pascale Kuntz, Fab...