Sciweavers

362 search results - page 31 / 73
» Finding Motifs with Gaps
Sort
View
CORR
2010
Springer
163views Education» more  CORR 2010»
13 years 7 months ago
Faster Rates for training Max-Margin Markov Networks
Structured output prediction is an important machine learning problem both in theory and practice, and the max-margin Markov network (M3 N) is an effective approach. All state-of-...
Xinhua Zhang, Ankan Saha, S. V. N. Vishwanathan
WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
14 years 1 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
BMCBI
2002
133views more  BMCBI 2002»
13 years 8 months ago
Identification and characterization of subfamily-specific signatures in a large protein superfamily by a hidden Markov model app
Background: Most profile and motif databases strive to classify protein sequences into a broad spectrum of protein families. The next step of such database studies should include ...
Kevin Truong, Mitsuhiko Ikura
ATAL
2006
Springer
14 years 12 days ago
Distributed Lagrangean relaxation protocol for the generalized mutual assignment problem
Abstract. The generalized assignment problem (GAP) is a typical NP-hard problem and has been studied for many years mainly in the operations research community. The goal of the GAP...
Katsutoshi Hirayama
SIAMAM
2000
71views more  SIAMAM 2000»
13 years 8 months ago
Wave-Block in Excitable Media Due to Regions of Depressed Excitability
We study propagation failure using the one-dimensional scalar bistable equation with a passive "gap" region. By applying comparison principles for this type of equation, ...
James P. Keener, Timothy J. Lewis