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BMCBI
2007
115views more  BMCBI 2007»
13 years 8 months ago
Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites
Background: We performed an exhaustive search for local structural similarities in an ensemble of non-redundant protein functional sites. With the purpose of finding new examples ...
Gabriele Ausiello, Daniele Peluso, Allegra Via, Ma...
BMCBI
2005
132views more  BMCBI 2005»
13 years 8 months ago
Kalign - an accurate and fast multiple sequence alignment algorithm
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Timo Lassmann, Erik L. L. Sonnhammer
BMCBI
2004
146views more  BMCBI 2004»
13 years 8 months ago
Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data
Background: Functional genomics studies are yielding information about regulatory processes in the cell at an unprecedented scale. In the yeast S. cerevisiae, DNA microarrays have...
Feng Gao, Barrett C. Foat, Harmen J. Bussemaker
ICCV
2009
IEEE
15 years 1 months ago
Detecting Interpretable and Accurate Scale-Invariant keypoints
This paper presents a novel method for detecting scale invariant keypoints. It fills a gap in the set of available methods, as it proposes a scale-selection mechanism for juncti...
Wolfgang F¨orstner, Timo Dickscheid, Falko Schind...
ICDE
2006
IEEE
164views Database» more  ICDE 2006»
14 years 10 months ago
A Partition-Based Approach to Graph Mining
Existing graph mining algorithms typically assume that databases are relatively static and can fit into the main memory. Mining of subgraphs in a dynamic environment is currently ...
Junmei Wang, Wynne Hsu, Mong-Li Lee, Chang Sheng