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» Finding Optimal Pairs of Patterns
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BMCBI
2007
141views more  BMCBI 2007»
13 years 7 months ago
HeliCis: a DNA motif discovery tool for colocalized motif pairs with periodic spacing
Background: Correct temporal and spatial gene expression during metazoan development relies on combinatorial interactions between different transcription factors. As a consequence...
Erik Larsson, Per Lindahl, Petter Mostad
SPIRE
2005
Springer
14 years 24 days ago
Composite Pattern Discovery for PCR Application
We consider the problem of finding pairs of short patterns such that, in a given input sequence of length n, the distance between each pair’s patterns is at least α. The proble...
Stanislav Angelov, Shunsuke Inenaga
IQIS
2004
ACM
14 years 23 days ago
Mining for Patterns in Contradictory Data
Information integration is often faced with the problem that different data sources represent the same set of the real-world objects, but give conflicting values for specific prop...
Heiko Müller, Ulf Leser, Johann Christoph Fre...
NIPS
2003
13 years 8 months ago
Learning to Find Pre-Images
We consider the problem of reconstructing patterns from a feature map. Learning algorithms using kernels to operate in a reproducing kernel Hilbert space (RKHS) express their solu...
Gökhan H. Bakir, Jason Weston, Bernhard Sch&o...
ECML
2007
Springer
13 years 11 months ago
Finding Composite Episodes
Mining frequent patterns is a major topic in data mining research, resulting in many seminal papers and algorithms on item set and episode discovery. The combination of these, call...
Ronnie Bathoorn, Arno Siebes