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    » Finding anchors for genomic sequence comparison
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    BMCBI
    2004
    98views more  BMCBI 2004»
    Incidence of "quasi-ditags" in catalogs generated by Serial Analysis of Gene Expression (SAGE)
    13 years 8 months ago
    Incidence of "quasi-ditags" in catalogs generated by Serial Analysis of Gene Expression (SAGE)
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    Background: Serial Analysis of Gene Expression (SAGE) is a functional genomic technique that quantitatively analyzes the cellular transcriptome. The analysis of SAGE libraries rel...
    Sergey V. Anisimov, Alexei A. Sharov
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    BMCBI
    2006
    141views more  BMCBI 2006»
    Asymptotic behaviour and optimal word size for exact and approximate word matches between random sequences
    13 years 8 months ago
    Asymptotic behaviour and optimal word size for exact and approximate word matches between random sequences
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    Background: The number of k-words shared between two sequences is a simple and effcient alignment-free sequence comparison method. This statistic, D2, has been used for the cluste...
    Sylvain Forêt, Miriam R. Kantorovitz, Conrad...
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    NAR
    2007
    115views more  NAR 2007»
    DroSpeGe: rapid access database for new Drosophila species genomes
    13 years 8 months ago
    DroSpeGe: rapid access database for new Drosophila species genomes
    Download  insects.eugenes.org
    The Drosophila species comparative genome database DroSpeGe (http://insects.eugenes.org/ DroSpeGe/) provides genome researchers with rapid, usable access to 12 new and old Drosoph...
    Donald G. Gilbert
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    BMCBI
    2007
    247views more  BMCBI 2007»
    A survey of DNA motif finding algorithms
    13 years 8 months ago
    A survey of DNA motif finding algorithms
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    Background: Unraveling the mechanisms that regulate gene expression is a major challenge in biology. An important task in this challenge is to identify regulatory elements, especi...
    Modan K. Das, Ho-Kwok Dai
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    BMCBI
    2008
    149views more  BMCBI 2008»
    Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence
    13 years 8 months ago
    Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence
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    Background: Modern proteomes evolved by modification of pre-existing ones. It is extremely important to comparative biology that related proteins be identified as members of the s...
    Adriano Barbosa-Silva, Venkata P. Satagopam, Reinh...
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