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BMCBI
2008
83views more  BMCBI 2008»
13 years 7 months ago
Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes
Background: Molecular typing methods are commonly used to study genetic relationships among bacterial isolates. Many of these methods have become standardized and produce portable...
Josephine F. Reyes, Andrew R. Francis, Mark M. Tan...
BMCBI
2008
95views more  BMCBI 2008»
13 years 7 months ago
Methodology capture: discriminating between the "best" and the rest of community practice
Background: The methodologies we use both enable and help define our research. However, as experimental complexity has increased the choice of appropriate methodologies has become...
James M. Eales, John W. Pinney, Robert D. Stevens,...
KDD
2009
ACM
181views Data Mining» more  KDD 2009»
14 years 2 months ago
An exploration of climate data using complex networks
To discover patterns in historical data, climate scientists have applied various clustering methods with the goal of identifying regions that share some common climatological beha...
Karsten Steinhaeuser, Nitesh V. Chawla, Auroop R. ...
ICFP
2006
ACM
14 years 7 months ago
biXid: a bidirectional transformation language for XML
Often, independent organizations define and advocate different XML formats for a similar purpose and, as a result, application programs need to mutually convert between such forma...
Shinya Kawanaka, Haruo Hosoya
EUROSYS
2010
ACM
13 years 11 months ago
Locating cache performance bottlenecks using data profiling
Effective use of CPU data caches is critical to good performance, but poor cache use patterns are often hard to spot using existing execution profiling tools. Typical profilers at...
Aleksey Pesterev, Nickolai Zeldovich, Robert T. Mo...