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» Finding effective compilation sequences
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RECOMB
2006
Springer
14 years 8 months ago
CONTRAlign: Discriminative Training for Protein Sequence Alignment
In this paper, we present CONTRAlign, an extensible and fully automatic framework for parameter learning and protein pairwise sequence alignment using pair conditional random field...
Chuong B. Do, Samuel S. Gross, Serafim Batzoglou
BMCBI
2010
118views more  BMCBI 2010»
13 years 7 months ago
Towards realistic benchmarks for multiple alignments of non-coding sequences
Background: With the continued development of new computational tools for multiple sequence alignment, it is necessary today to develop benchmarks that aid the selection of the mo...
Jaebum Kim, Saurabh Sinha
ICDE
2008
IEEE
162views Database» more  ICDE 2008»
14 years 9 months ago
Querying Complex Spatio-Temporal Sequences in Human Motion Databases
Content-based retrieval of spatio-temporal patterns from human motion databases is inherently nontrivial since finding effective distance measures for such data is difficult. These...
Yueguo Chen, Shouxu Jiang, Beng Chin Ooi, Anthony ...
JCB
2008
52views more  JCB 2008»
13 years 7 months ago
Spectrum-Based De Novo Repeat Detection in Genomic Sequences
A novel approach to the detection of genomic repeats is presented in this paper. The technique, dubbed SAGRI (Spectrum Assisted Genomic Repeat Identifier), is based on the spectru...
Huy Hoang Do, Kwok Pui Choi, Franco P. Preparata, ...
MMM
2005
Springer
146views Multimedia» more  MMM 2005»
14 years 1 months ago
Retrieval of News Video Using Video Sequence Matching
In this paper, we propose a new algorithm to find video clips with different temporal durations and some spatial variations. We adopt a longest common subsequence (LCS) matching t...
Young-tae Kim, Tat-Seng Chua