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CSR
2006
Springer
13 years 11 months ago
Fast Motif Search in Protein Sequence Databases
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
Elena Zheleva, Abdullah N. Arslan
RTS
2006
84views more  RTS 2006»
13 years 7 months ago
Improving WCET by applying worst-case path optimizations
It is advantageous to perform compiler optimizations that attempt to lower the worst-case execution time (WCET) of an embedded application since tasks with lower WCETs are easier ...
Wankang Zhao, William C. Kreahling, David B. Whall...
BMCBI
2005
111views more  BMCBI 2005»
13 years 7 months ago
Improving interoperability between microbial information and sequence databases
Background: Biological resources are essential tools for biomedical research. Their availability is promoted through on-line catalogues. Common Access to Biological Resources and ...
Paolo Romano, Peter Dawyndt, Francesca Piersigilli...
BMCBI
2008
111views more  BMCBI 2008»
13 years 7 months ago
SciDBMaker: new software for computer-aided design of specialized biological databases
Background: The exponential growth of research in molecular biology has brought concomitant proliferation of databases for stocking its findings. A variety of protein sequence dat...
Riadh Hammami, Abdelmajid Zouhir, Karim Naghmouchi...
ATAL
2001
Springer
14 years 5 days ago
Commitment Machines
We develop an approach in which we model communication protocols via commitment machines. Commitment machines supply a content to protocol states and actions in terms of the social...
Pinar Yolum, Munindar P. Singh