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BMCBI
2010
83views more  BMCBI 2010»
13 years 8 months ago
Trees on networks: resolving statistical patterns of phylogenetic similarities among interacting proteins
Background: Phylogenies capture the evolutionary ancestry linking extant species. Correlations and similarities among a set of species are mediated by and need to be understood in...
William P. Kelly, Michael P. H. Stumpf
ICSE
2008
IEEE-ACM
14 years 9 months ago
Scalable detection of semantic clones
Several techniques have been developed for identifying similar code fragments in programs. These similar fragments, referred to as code clones, can be used to identify redundant c...
Mark Gabel, Lingxiao Jiang, Zhendong Su
ICDT
2009
ACM
150views Database» more  ICDT 2009»
14 years 9 months ago
Optimizing user views for workflows
A technique called user views has recently been proposed to focus user attention on relevant information in response to provenance queries over workflow executions [1, 2]: Given u...
Olivier Biton, Susan B. Davidson, Sanjeev Khanna, ...
RECOMB
2005
Springer
14 years 9 months ago
Pairwise Local Alignment of Protein Interaction Networks Guided by Models of Evolution
Abstract. With ever increasing amount of available data on protein-protein interaction (PPI) networks and research revealing that these networks evolve at a modular level, discover...
Mehmet Koyutürk, Ananth Grama, Wojciech Szpan...
RECOMB
2004
Springer
14 years 9 months ago
A random graph approach to NMR sequential assignment
Nuclear magnetic resonance (NMR) spectroscopy allows scientists to study protein structure, dynamics and interactions in solution. A necessary first step for such applications is ...
Chris Bailey-Kellogg, Sheetal Chainraj, Gopal Pand...