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ALMOB
2006
138views more  ALMOB 2006»
13 years 8 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh
CCCG
2010
13 years 10 months ago
Towards a dynamic data structure for efficient bounded line range search
We present a data structure for efficient axis-aligned orthogonal range search on a set of n lines in a bounded plane. The algorithm requires O(log n + k) time in the worst case t...
Thuy Le, Bradford G. Nickerson
SIGCSE
2004
ACM
140views Education» more  SIGCSE 2004»
14 years 2 months ago
CFX: finding just the right examples for CS1
Finding just the right example to answer a question can be difficult for CS1 students and teachers. For this to work well there must be an intuitive interface coupled to an approp...
Dale Reed, Sam John, Ryan Aviles, Feihong Hsu
BMCBI
2004
96views more  BMCBI 2004»
13 years 8 months ago
Gene finding in novel genomes
Background: Computational gene prediction continues to be an important problem, especially for genomes with little experimental data. Results: I introduce the SNAP gene finder whi...
Ian Korf
ICDE
2009
IEEE
163views Database» more  ICDE 2009»
14 years 10 months ago
A Data Structure for Sponsored Search
Abstract-- Inverted files have been very successful for document retrieval, but sponsored search is different. Inverted files are designed to find documents that match the query (a...
Arnd Christian König, Kenneth Ward Church, Ma...