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BMCBI
2006
95views more  BMCBI 2006»
13 years 8 months ago
A quantitative analysis of secondary RNA structure using domination based parameters on trees
Background: It has become increasingly apparent that a comprehensive database of RNA motifs is essential in order to achieve new goals in genomic and proteomic research. Secondary...
Teresa W. Haynes, Debra J. Knisley, Edith Seier, Y...
WWW
2008
ACM
14 years 9 months ago
Statistical properties of community structure in large social and information networks
A large body of work has been devoted to identifying community structure in networks. A community is often though of as a set of nodes that has more connections between its member...
Jure Leskovec, Kevin J. Lang, Anirban Dasgupta, Mi...
RECOMB
2004
Springer
14 years 9 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
BMCBI
2010
148views more  BMCBI 2010»
13 years 8 months ago
Structuring heterogeneous biological information using fuzzy clustering of k-partite graphs
Background: Extensive and automated data integration in bioinformatics facilitates the construction of large, complex biological networks. However, the challenge lies in the inter...
Mara L. Hartsperger, Florian Blöchl, Volker S...
ADBIS
2003
Springer
114views Database» more  ADBIS 2003»
14 years 1 months ago
Compressing Large Signature Trees
In this paper we present a new compression scheme for signature tree structures. Beyond the reduction of storage space, compression attains significant savings in terms of query pr...
Maria Kontaki, Yannis Manolopoulos, Alexandros Nan...