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BMCBI
2006
180views more  BMCBI 2006»
13 years 7 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
BMCBI
2006
202views more  BMCBI 2006»
13 years 7 months ago
DWARF - a data warehouse system for analyzing protein families
Background: The emerging field of integrative bioinformatics provides the tools to organize and systematically analyze vast amounts of highly diverse biological data and thus allo...
Markus Fischer, Quan K. Thai, Melanie Grieb, J&uum...
BDA
2001
13 years 9 months ago
Query-Driven Knowledge Discovery via OLAP manipulations
We study KDD (Knowledge Discovery in Databases) processes on OLAP (multidimensional and multilevel) data from a query point of view. Focusing on association rule mining, we consid...
Jean-François Boulicaut, Patrick Marcel, Ch...
BMCBI
2010
113views more  BMCBI 2010»
13 years 8 months ago
A classification model for distinguishing copy number variants from cancer-related alterations
Background: Both somatic copy number alterations (CNAs) and germline copy number variants (CNVs) that are prevalent in healthy individuals can appear as recurrent changes in compa...
Irina Ostrovnaya, Gouri Nanjangud, Adam B. Olshen
MEDES
2010
ACM
13 years 2 months ago
Brazilian public software: beyond sharing
This work presents a case of an innovative Brazilian experience of use of free software in public administration as an emergent ecosystem, and the attempt to establish a quality f...
A. M. Alves, Marcelo Schneck de Paula Pessôa