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ALMOB
2006
155views more  ALMOB 2006»
13 years 7 months ago
Refining motifs by improving information content scores using neighborhood profile search
The main goal of the motif finding problem is to detect novel, over-represented unknown signals in a set of sequences (e.g. transcription factor binding sites in a genome). The mo...
Chandan K. Reddy, Yao-Chung Weng, Hsiao-Dong Chian...
BMCBI
2006
103views more  BMCBI 2006»
13 years 7 months ago
Statistical inference of chromosomal homology based on gene colinearity and applications to Arabidopsis and rice
Background: The identification of chromosomal homology will shed light on such mysteries of genome evolution as DNA duplication, rearrangement and loss. Several approaches have be...
Xiyin Wang, Xiaoli Shi, Zhe Li, Qihui Zhu, Lei Kon...
BMCBI
2007
133views more  BMCBI 2007»
13 years 7 months ago
Semi-supervised learning for the identification of syn-expressed genes from fused microarray and in situ image data
Background: Gene expression measurements during the development of the fly Drosophila melanogaster are routinely used to find functional modules of temporally co-expressed genes. ...
Ivan G. Costa, Roland Krause, Lennart Opitz, Alexa...
INFOCOM
2007
IEEE
14 years 1 months ago
Can Retransmissions of Superexponential Documents Cause Subexponential Delays?
— Consider a generic data unit of random size L that needs to be transmitted over a channel of unit capacity. The channel dynamics is modeled as an on-off process {(Ai, Ui)}i≥1...
Predrag R. Jelenkovic, Jian Tan
SIGCOMM
2005
ACM
14 years 28 days ago
Using redundancy to cope with failures in a delay tolerant network
We consider the problem of routing in a delay tolerant network (DTN) in the presence of path failures. Previous work on DTN routing has focused on using precisely known network dy...
Sushant Jain, Michael J. Demmer, Rabin K. Patra, K...