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ISSS
2002
IEEE
124views Hardware» more  ISSS 2002»
14 years 16 days ago
Timing Analysis of Embedded Software for Speculative Processors
Static timing analysis of embedded software is important for systems with hard real-time constraints. To accurately estimate time bounds, it is essential to model the underlying m...
Abhik Roychoudhury, Xianfeng Li, Tulika Mitra
RECOMB
2008
Springer
14 years 8 months ago
Bootstrapping the Interactome: Unsupervised Identification of Protein Complexes in Yeast
Protein interactions and complexes are major components of biological systems. Recent genome-wide applications of tandem affinity purification (TAP) in yeast have increased signifi...
Caroline C. Friedel, Jan Krumsiek, Ralf Zimmer
EVOW
2007
Springer
14 years 1 months ago
Modeling the Shoot Apical Meristem in A. thaliana : Parameter Estimation for Spatial Pattern Formation
Understanding the self-regulatory mechanisms controlling the spatial and temporal structure of multicellular organisms represents one of the major challenges in molecular biology. ...
Tim Hohm, Eckart Zitzler
ALIFE
2005
13 years 7 months ago
Levels of Description: A Novel Approach to Dynamical Hierarchies
We present a novel formal interpretation of dynamical hierarchies based on information theory, in which each level is a near-state-determined system, and levels are related to one ...
Simon McGregor, Chrisantha Fernando
BMCBI
2008
153views more  BMCBI 2008»
13 years 7 months ago
Estimating the size of the solution space of metabolic networks
Background: Cellular metabolism is one of the most investigated system of biological interactions. While the topological nature of individual reactions and pathways in the network...
Alfredo Braunstein, Roberto Mulet, Andrea Pagnani