A tanglegram consists of a pair of (not necessarily binary) trees T1, T2 with leaf sets L1, L2. Additional edges, called tangles, may connect nodes in L1 with those in L2. The task...
In this paper we propose new solution methods for designing tag sets for use in universal DNA arrays. First, we give integer linear programming formulations for two previous formal...
Abstract. In this paper, we use integer programming approach for solving a hard combinatorial optimization problem, namely protein threading. For this sequence-to-structure alignme...
Philippe Veber, Nicola Yanev, Rumen Andonov, Vince...
Abstract. This paper focuses on a class of problem relating to the multiplication of a single number by several coefficients that, while not constant, are drawn from a finite set ...
Nalin Sidahao, George A. Constantinides, Peter Y. ...
Abstract--Power-awareness in networking attracts more attention as the trends in the energy consumption of the Internet raise growing concerns about the environmental impacts and s...