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BMCBI
2007
169views more  BMCBI 2007»
13 years 8 months ago
Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and i
Background: Gene expression microarray and other multiplex data hold promise for addressing the challenges of cellular complexity, refined diagnoses and the discovery of well-targ...
Abdallah Sayyed-Ahmad, Kagan Tuncay, Peter J. Orto...
BMCBI
2007
106views more  BMCBI 2007»
13 years 8 months ago
Mining prokaryotic genomes for unknown amino acids: a stop-codon-based approach
Background: Selenocysteine and pyrrolysine are the 21st and 22nd amino acids, which are genetically encoded by stop codons. Since a number of microbial genomes have been completel...
Masashi Fujita, Hisaaki Mihara, Susumu Goto, Nobuy...
BMCBI
2008
115views more  BMCBI 2008»
13 years 8 months ago
Probe signal correction for differential methylation hybridization experiments
Background: Non-biological signal (or noise) has been the bane of microarray analysis. Hybridization effects related to probe-sequence composition and DNA dye-probe interactions h...
Dustin P. Potter, Pearlly Yan, Tim Hui-Ming Huang,...
CL
2008
Springer
13 years 8 months ago
Efficient exception handling in Java bytecode-to-C ahead-of-time compiler for embedded systems
One of the most promising approaches to Java acceleration in embedded systems is a bytecode-to-C ahead-of-time compiler (AOTC). It improves the performance of a Java virtual machi...
Dong-Heon Jung, Jong Kuk Park, Sung-Hwan Bae, Jaem...
BMCBI
2006
60views more  BMCBI 2006»
13 years 8 months ago
Use of a multi-way method to analyze the amino acid composition of a conserved group of orthologous proteins in prokaryotes
Background: Amino acids in proteins are not used equally. Some of the differences in the amino acid composition of proteins are between species (mainly due to nucleotide compositi...
Alberto Pasamontes, Santiago Garcia-Vallvé