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» Framework for a Protein Ontology
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BMCBI
2006
169views more  BMCBI 2006»
13 years 8 months ago
Assessing protein similarity with Gene Ontology and its use in subnuclear localization prediction
Background: The accomplishment of the various genome sequencing projects resulted in accumulation of massive amount of gene sequence information. This calls for a large-scale comp...
Zhengdeng Lei, Yang Dai
BIBE
2004
IEEE
128views Bioinformatics» more  BIBE 2004»
14 years 16 days ago
Towards a Proteomics Meta-Classification
There is a recognized need for a meta-classification that can serve as a foundation for more refined ontologies in the field of proteomics. Standard data sources classify proteins...
Anand Kumar, Barry Smith
BMCBI
2006
150views more  BMCBI 2006»
13 years 8 months ago
Cluster analysis of protein array results via similarity of Gene Ontology annotation
Background: With the advent of high-throughput proteomic experiments such as arrays of purified proteins comes the need to analyse sets of proteins as an ensemble, as opposed to t...
Cheryl Wolting, C. Jane McGlade, David Tritchler
NAR
2011
179views Computer Vision» more  NAR 2011»
12 years 11 months ago
The Protein Ontology: a structured representation of protein forms and complexes
The Protein Ontology (PRO) provides a formal, logically-based classification of specific protein classes including structured representations of protein isoforms, variants and mod...
Darren A. Natale, Cecilia N. Arighi, Winona C. Bar...
SEMWEB
2007
Springer
14 years 2 months ago
A Framework for Cooperative Ontology Construction Based on Dependency Management of Modules
To construct large scale ontologies, two major approaches are discussed by many researchers. One is a cooperative construction of ontologies, and the other is a modularization of o...
Kouji Kozaki, Eiichi Sunagawa, Yoshinobu Kitamura,...