Sciweavers

278 search results - page 12 / 56
» From Gene Trees to Species Trees
Sort
View
BMCBI
2008
138views more  BMCBI 2008»
13 years 10 months ago
Automated simultaneous analysis phylogenetics (ASAP): an enabling tool for phlyogenomics
Background: The availability of sequences from whole genomes to reconstruct the tree of life has the potential to enable the development of phylogenomic hypotheses in ways that ha...
Indra Neil Sarkar, Mary G. Egan, Gloria M. Coruzzi...
TKDE
2008
153views more  TKDE 2008»
13 years 9 months ago
Discovering Frequent Agreement Subtrees from Phylogenetic Data
We study a new data mining problem concerning the discovery of frequent agreement subtrees (FASTs) from a set of phylogenetic trees. A phylogenetic tree, or phylogeny, is an unorde...
Sen Zhang, Jason Tsong-Li Wang
WABI
2004
Springer
14 years 3 months ago
Reconstructing Ancestral Gene Orders Using Conserved Intervals
Conserved intervals were recently introduced as a measure of similarity between genomes whose genes have been shuffled during evolution by genomic rearrangements. Phylogenetic reco...
Anne Bergeron, Mathieu Blanchette, Annie Chateau, ...
INFOVIS
2002
IEEE
14 years 2 months ago
Case Study: Visualizing Sets of Evolutionary Trees
We describe a visualization tool which allows a biologist to explore a large set of hypothetical evolutionary trees. Interacting with such a dataset allows the biologist to identi...
Nina Amenta, Jeff Klingner
ESA
1999
Springer
89views Algorithms» more  ESA 1999»
14 years 2 months ago
On the Informational Asymmetry between Upper and Lower Bounds for Ultrametric Evolutionary Trees
Abstract. This paper addresses the informational asymmetry for constructing an ultrametric evolutionary tree from upper and lower bounds on pairwise distances between n given speci...
Ting Chen, Ming-Yang Kao