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NLDB
2005
Springer
14 years 1 months ago
Combining Biological Databases and Text Mining to Support New Bioinformatics Applications
Abstract. A large amount of biological knowledge today is only available from full-text research papers. Since neither manual database curators nor users can keep up with the rapid...
René Witte, Christopher J. O. Baker
XPU
2007
Springer
14 years 1 months ago
A Case Study of the Implementation of Agile Methods in a Bioinformatics Project
From July 2005 to August 2006, a bioinformatics project experienced a substantial transformation by adopting Scrum and some XP practices. The paper reveals project risks, previous ...
Xueling Shu, Andrei L. Turinsky, Christoph W. Sens...
CAI
2009
Springer
14 years 2 months ago
Picture Languages: From Wang Tiles to 2D Grammars
The aim of this paper is to collect definitions and results on the main classes of 2D languages introduced with the attempt of generalizing regular and context-free string languag...
Alessandra Cherubini, Matteo Pradella
BMCBI
2010
214views more  BMCBI 2010»
13 years 7 months ago
AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number
Background: Clustering the information content of large high-dimensional gene expression datasets has widespread application in "omics" biology. Unfortunately, the under...
Aaron M. Newman, James B. Cooper
BIOCOMP
2006
13 years 9 months ago
Performance of Sequence Alignment Bioinformatics Applications on General Purpose Processors: A Case Study
- Aligning specific sequences against other known sequences in a database is a central aspect of bioinformatics. New experimental data being added continuously to these databases n...
Pradeep Nair, Eugene John