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» From Text to Pathway: Corpus Annotation for Knowledge Acquis...
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BMCBI
2008
150views more  BMCBI 2008»
13 years 7 months ago
BibGlimpse: The case for a light-weight reprint manager in distributed literature research
Background: While text-mining and distributed annotation systems both aim at capturing knowledge and presenting it in a standardized form, there have been few attempts to investig...
Thomas Tüchler, Golda Velez, Alexandra Graf, ...
BMCBI
2008
158views more  BMCBI 2008»
13 years 7 months ago
Discovering gene annotations in biomedical text databases
Currently, most of the discovered biological and biomedical knowledge is available as textual data in scientific papers. And, locating and curating information about a genomic enti...
Ali Cakmak, Gultekin Özsoyoglu
BMCBI
2010
110views more  BMCBI 2010»
13 years 7 months ago
Concept-based query expansion for retrieving gene related publications from MEDLINE
Background: Advances in biotechnology and in high-throughput methods for gene analysis have contributed to an exponential increase in the number of scientific publications in thes...
Sérgio Matos, Joel Arrais, João Maia...
FLAIRS
2009
13 years 5 months ago
Improving Biomedical Document Retrieval by Mining Domain Knowledge
When research articles introduce new findings or concepts they typically relate them only to knowledge and domain concepts of immediate relevance. However, many domain concepts re...
Shuguang Wang, Milos Hauskrecht
DEXAW
2005
IEEE
170views Database» more  DEXAW 2005»
14 years 1 months ago
Functional Annotation of Genes through Statistical Analysis of Biomedical Articles
One of the most elaborate and important tasks in biology is the functional annotation of genes. Biologists have developed standardized and structured vocabularies, called bio-onto...
Theodosios Theodosiou, Lefteris Angelis, Athena Va...