Abstract. DNA copy number is the number of replicates of a contiguous segment of DNA on the genome. Copy number alteration (CNA) is a genetic abnormality in which the number of the...
Abstract--A hybrid MPI/Pthreads parallelization was implemented in the RAxML phylogenetics code. New MPI code was added to the existing Pthreads production code to exploit parallel...
The current trend in HPC hardware is towards clusters of shared-memory (SMP) compute nodes. For applications developers the major question is how best to program these SMP cluster...
Active Harmony is an automated runtime performance tuning system. In this paper we describe a parameter prioritizing tool to help focus on those parameters that are performance cr...
Verification of partially synchronous distributed systems is difficult because of inherent concurrency and the potentially large state space of the channels. This paper identifies ...