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BMCBI
2004
208views more  BMCBI 2004»
13 years 7 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein
SIGMOD
2010
ACM
170views Database» more  SIGMOD 2010»
14 years 8 days ago
Querying data provenance
Many advanced data management operations (e.g., incremental maintenance, trust assessment, debugging schema mappings, keyword search over databases, or query answering in probabil...
Grigoris Karvounarakis, Zachary G. Ives, Val Tanne...
SAC
2010
ACM
13 years 5 months ago
A formal approach to reuse successful traceability practices in SPL projects
Software Product Line (SPL) Engineering has to deal with interrelated, complex models such as feature and architecture models, hence traceability is fundamental to keep them consi...
Angelina Espinoza, Goetz Botterweck, Juan Garbajos...
CLADE
2008
IEEE
14 years 1 months ago
SWARM: a scientific workflow for supporting bayesian approaches to improve metabolic models
With the exponential growth of complete genome sequences, the analysis of these sequences is becoming a powerful approach to build genome-scale metabolic models. These models can ...
Xinghua Shi, Rick Stevens
GI
2009
Springer
13 years 5 months ago
Constraint-Based Task Scheduling with Sequence Dependent Setup Times, Time Windows and Breaks
Abstract: The work presented in this article generalizes the modeling of task scheduling problems with sequence dependent setup time on the basis of task scheduling on single respe...
Armin Wolf