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BMCBI
2007
136views more  BMCBI 2007»
13 years 8 months ago
Genomorama: genome visualization and analysis
Background: The ability to visualize genomic features and design experimental assays that can target specific regions of a genome is essential for modern biology. To assist in the...
Jason D. Gans, Murray Wolinsky
BMCBI
2006
130views more  BMCBI 2006»
13 years 8 months ago
4SALE - A tool for synchronous RNA sequence and secondary structure alignment and editing
Background: In sequence analysis the multiple alignment builds the fundament of all proceeding analyses. Errors in an alignment could strongly influence all succeeding analyses an...
Philipp N. Seibel, Tobias Müller, Thomas Dand...
ENTCS
2007
116views more  ENTCS 2007»
13 years 8 months ago
Experiments in Cost Analysis of Java Bytecode
Recently, we proposed a general framework for the cost analysis of Java bytecode which can be used for measuring resource usage. This analysis generates, at compile-time, cost rel...
Elvira Albert, Puri Arenas, Samir Genaim, Germ&aac...
JCB
2007
146views more  JCB 2007»
13 years 8 months ago
MSOAR: A High-Throughput Ortholog Assignment System Based on Genome Rearrangement
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
JFP
2010
107views more  JFP 2010»
13 years 6 months ago
Lightweight checkpointing for concurrent ML
Transient faults that arise in large-scale software systems can often be repaired by re-executing the code in which they occur. Ascribing a meaningful semantics for safe re-execut...
Lukasz Ziarek, Suresh Jagannathan