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BMCBI
2008
158views more  BMCBI 2008»
13 years 8 months ago
Metrics for GO based protein semantic similarity: a systematic evaluation
Background: Several semantic similarity measures have been applied to gene products annotated with Gene Ontology terms, providing a basis for their functional comparison. However,...
Catia Pesquita, Daniel Faria, Hugo P. Bastos, Ant&...
ICWE
2010
Springer
13 years 6 months ago
Quality-Based Recommendations for Mashup Composition
When composing mashups, the selection of suitable services is mainly based on functional requirements and does not consider the quality of the single services. In this paper, we sh...
Matteo Picozzi, Marta Rodolfi, Cinzia Cappiello, M...
MKWI
2008
135views Business» more  MKWI 2008»
13 years 9 months ago
Ontology-based process mediation in the European project BRITE
: Service-oriented architectures (SOA) are recent architectures enabling interoperable machine-to-machine process interaction by generating a comprehensive view of independent soft...
Ansgar Mondorf, Timo Herborn
BMCBI
2010
115views more  BMCBI 2010»
13 years 8 months ago
Multiconstrained gene clustering based on generalized projections
Background: Gene clustering for annotating gene functions is one of the fundamental issues in bioinformatics. The best clustering solution is often regularized by multiple constra...
Jia Zeng, Shanfeng Zhu, Alan Wee-Chung Liew, Hong ...
BMCBI
2007
94views more  BMCBI 2007»
13 years 8 months ago
False positive reduction in protein-protein interaction predictions using gene ontology annotations
Background: Many crucial cellular operations such as metabolism, signalling, and regulations are based on protein-protein interactions. However, the lack of robust protein-protein...
Mahmood A. Mahdavi, Yen-Han Lin