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BMCBI
2005
133views more  BMCBI 2005»
13 years 7 months ago
Systematic determination of the mosaic structure of bacterial genomes: species backbone versus strain-specific loops
Background: Public databases now contain multitude of complete bacterial genomes, including several genomes of the same species. The available data offers new opportunities to add...
Hélène Chiapello, I. Bourgait, F. So...
NAR
2011
225views Computer Vision» more  NAR 2011»
12 years 10 months ago
PHOSIDA 2011: the posttranslational modification database
The primary purpose of PHOSIDA (http://www .phosida.com) is to manage posttranslational modification sites of various species ranging from bacteria to human. Since its last report...
Florian Gnad, Jeremy Gunawardena, Matthias Mann 00...
NAR
2011
203views Computer Vision» more  NAR 2011»
12 years 10 months ago
ViralZone: a knowledge resource to understand virus diversity
The molecular diversity of viruses complicates the interpretation of viral genomic and proteomic data. To make sense of viral gene functions, investigators must be familiar with t...
Chantal Hulo, Edouard De Castro, Patrick Masson, L...
BIOINFORMATICS
2010
94views more  BIOINFORMATICS 2010»
13 years 7 months ago
Globally, unrelated protein sequences appear random
Motivation: To test whether protein folding constraints and secondary structure sequence preferences significantly reduce the space of amino acid words in proteins, we compared th...
Daniel T. Lavelle, William R. Pearson
NAR
2002
138views more  NAR 2002»
13 years 7 months ago
The Protein Information Resource: an integrated public resource of functional annotation of proteins
The Protein Information Resource (PIR) serves as an integrated public resource of functional annotation of protein data to support genomic/proteomic research and scientific discov...
Cathy H. Wu, Hongzhan Huang, Leslie Arminski, Jorg...