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» Functional topology in a network of protein interactions
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BMCBI
2010
97views more  BMCBI 2010»
13 years 7 months ago
Dual-functioning transcription factors in the developmental gene network of Drosophila melanogaster
Background: Quantitative models for transcriptional regulation have shown great promise for advancing our understanding of the biological mechanisms underlying gene regulation. Ho...
Denis C. Bauer, Fabian A. Buske, Timothy L. Bailey
NIPS
2004
13 years 9 months ago
Validity Estimates for Loopy Belief Propagation on Binary Real-world Networks
We introduce a computationally efficient method to estimate the validity of the BP method as a function of graph topology, the connectivity strength, frustration and network size....
Joris M. Mooij, Hilbert J. Kappen
SIGCOMM
2010
ACM
13 years 7 months ago
Ripcord: a modular platform for data center networking
In this demo, we present Ripcord, a modular platform for rapidly prototyping scale-out data center networks. Ripcord enables researchers to build and evaluate new network features...
Brandon Heller, David Erickson, Nick McKeown, Rean...
ECAL
2005
Springer
14 years 1 months ago
Biological Development of Cell Patterns: Characterizing the Space of Cell Chemistry Genetic Regulatory Networks
Abstract. Genetic regulatory networks (GRNs) control gene expression and are responsible for establishing the regular cellular patterns that constitute an organism. This paper intr...
Nicholas S. Flann, Jing Hu, Mayank Bansal, Vinay P...
BMCBI
2005
292views more  BMCBI 2005»
13 years 7 months ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...