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BMCBI
2007
112views more  BMCBI 2007»
13 years 7 months ago
Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis
Background: Gene clustering has been widely used to group genes with similar expression pattern in microarray data analysis. Subsequent enrichment analysis using predefined gene s...
Tae-Min Kim, Yeun-Jun Chung, Mun-Gan Rhyu, Myeong ...
FSS
2006
140views more  FSS 2006»
13 years 7 months ago
Advances and challenges in interval-valued fuzzy logic
Among the various extensions to the common [0, 1]-valued truth degrees of "traditional" fuzzy set theory, closed intervals of [0, 1] stand out as a particularly appealin...
Chris Cornelis, Glad Deschrijver, Etienne E. Kerre
IM
2007
13 years 6 months ago
In-Degree and PageRank: Why Do They Follow Similar Power Laws?
PageRank is a popularity measure designed by Google to rank Web pages. Experiments confirm that PageRank values obey a power law with the same exponent as In-Degree values. This ...
Nelly Litvak, Werner R. W. Scheinhardt, Yana Volko...
BMCBI
2005
153views more  BMCBI 2005»
13 years 6 months ago
A comparative review of estimates of the proportion unchanged genes and the false discovery rate
Background: In the analysis of microarray data one generally produces a vector of p-values that for each gene give the likelihood of obtaining equally strong evidence of change by...
Per Broberg
BMCBI
2004
141views more  BMCBI 2004»
13 years 6 months ago
Estimates of statistical significance for comparison of individual positions in multiple sequence alignments
Background: Profile-based analysis of multiple sequence alignments (MSA) allows for accurate comparison of protein families. Here, we address the problems of detecting statistical...
Ruslan Sadreyev, Nick V. Grishin