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BMCBI
2007
181views more  BMCBI 2007»
13 years 10 months ago
Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases
Background: In recent years, mammalian protein-protein interaction network databases have been developed. The interactions in these databases are either extracted manually from lo...
Seth I. Berger, Jeremy M. Posner, Avi Ma'ayan
BMCBI
2008
146views more  BMCBI 2008»
13 years 10 months ago
A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
Background: The previous studies of genome-wide expression patterns show that a certain percentage of genes are cell cycle regulated. The expression data has been analyzed in a nu...
Chang Sik Kim, Cheol Soo Bae, Hong Joon Tcha
BMCBI
2010
110views more  BMCBI 2010»
13 years 10 months ago
GenHtr: a tool for comparative assessment of genetic heterogeneity in microbial genomes generated by massive short-read sequenci
Background: Microevolution is the study of short-term changes of alleles within a population and their effects on the phenotype of organisms. The result of the below-species-level...
GongXin Yu
BMCBI
2007
103views more  BMCBI 2007»
13 years 10 months ago
eQTL Viewer: visualizing how sequence variation affects genome-wide transcription
Background: Expression Quantitative Trait Locus (eQTL) mapping methods have been used to identify the genetic basis of gene expression variations. To map eQTL, thousands of expres...
Wei Zou, David L. Aylor, Zhao-Bang Zeng
CACM
2008
84views more  CACM 2008»
13 years 10 months ago
The emergence of a networking primitive in wireless sensor networks
The wireless sensor network community approached netabstractions as an open question, allowing answers to emerge with time and experience. The Trickle algorithm has become a basic...
Philip Levis, Eric A. Brewer, David E. Culler, Dav...