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BMCBI
2010
240views more  BMCBI 2010»
13 years 9 months ago
CircuitsDB: a database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse
Background: Transcription Factors (TFs) and microRNAs (miRNAs) are key players for gene expression regulation in higher eukaryotes. In the last years, a large amount of bioinforma...
Olivier Friard, Angela Re, Daniela Taverna, Michel...
TCBB
2008
107views more  TCBB 2008»
13 years 9 months ago
Coclustering of Human Cancer Microarrays Using Minimum Sum-Squared Residue Coclustering
It is a consensus in microarray analysis that identifying potential local patterns, characterized by coherent groups of genes and conditions, may shed light on the discovery of pre...
Hyuk Cho, Inderjit S. Dhillon
BMCBI
2007
115views more  BMCBI 2007»
13 years 8 months ago
SpliceMiner: a high-throughput database implementation of the NCBI Evidence Viewer for microarray splice variant analysis
Background: There are many fewer genes in the human genome than there are expressed transcripts. Alternative splicing is the reason. Alternatively spliced transcripts are often sp...
Ari B. Kahn, Michael C. Ryan, Hongfang Liu, Barry ...
BIOINFORMATICS
2005
105views more  BIOINFORMATICS 2005»
13 years 9 months ago
MADE4: an R package for multivariate analysis of gene expression data
Summary: MADE4, microarray ade4, is a software package that facilitates multivariate analysis of microarray gene expression data. MADE4 accepts a wide variety of gene expression d...
Aedín C. Culhane, Jean Thioulouse, Guy Perr...
ESANN
2007
13 years 10 months ago
Kernel PCA based clustering for inducing features in text categorization
We study dimensionality reduction or feature selection in text document categorization problem. We focus on the first step in building text categorization systems, that is the cho...
Zsolt Minier, Lehel Csató