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BMCBI
2007
114views more  BMCBI 2007»
13 years 9 months ago
Large scale statistical inference of signaling pathways from RNAi and microarray data
Background: The advent of RNA interference techniques enables the selective silencing of biologically interesting genes in an efficient way. In combination with DNA microarray tec...
Holger Fröhlich, Mark Fellmann, Holger Sü...
BMCBI
2005
292views more  BMCBI 2005»
13 years 8 months ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...
BMCBI
2005
105views more  BMCBI 2005»
13 years 8 months ago
SNPHunter: a bioinformatic software for single nucleotide polymorphism data acquisition and management
Background: Single nucleotide polymorphisms (SNPs) provide an important tool in pinpointing susceptibility genes for complex diseases and in unveiling human molecular evolution. S...
Lin Wang, Simin Liu, Tianhua Niu, Xin Xu
BMCBI
2010
122views more  BMCBI 2010»
13 years 4 months ago
Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PF
Background: A new paradigm of biological investigation takes advantage of technologies that produce large high throughput datasets, including genome sequences, interactions of pro...
Troy Hawkins, Meghana Chitale, Daisuke Kihara
TREC
2003
13 years 10 months ago
Experiments in TREC 2003 Genomics Track at NTT
500,000 PubMed abstracts. However, less than 50 documents are relevant for most queries. Applying scoring to all 500,000 abstracts would create a lot of noise. In the first step, ...
Hirotoshi Taira, Tomonori Izumitani, Tsutomu Hirao...