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    BMCBI
    2005
    121views more  BMCBI 2005»
    Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data
    13 years 7 months ago
    Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data
    Download  www.biomedcentral.com
    Background: A critical step in processing oligonucleotide microarray data is combining the information in multiple probes to produce a single number that best captures the express...
    Kerby Shedden, Wei Chen, Rork Kuick, Debashis Ghos...
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    BMCBI
    2007
    130views more  BMCBI 2007»
    A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
    13 years 7 months ago
    A model-based optimization framework for the inference of regulatory interactions using time-course DNA microarray expression da
    Download  www.biomedcentral.com
    Background: Proteins are the primary regulatory agents of transcription even though mRNA expression data alone, from systems like DNA microarrays, are widely used. In addition, th...
    Reuben Thomas, Carlos J. Paredes, Sanjay Mehrotra,...
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    BIBE
    2004
    IEEE
    179views Bioinformatics» more  BIBE 2004»
    Incorporating Ontology-Driven Similarity Knowledge into Functional Genomics: An Exploratory Study
    13 years 11 months ago
    Incorporating Ontology-Driven Similarity Knowledge into Functional Genomics: An Exploratory Study
    Download  lhncbc.nlm.nih.gov
    This research explores the feasibility of semantic similarity approaches to supporting predictive tasks in functional genomics. It aims to establish potential relationships betwee...
    Francisco Azuaje, Olivier Bodenreider
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    CSB
    2005
    IEEE
    205views Bioinformatics» more  CSB 2005»
    Fractal Clustering for Microarray Data Analysis
    14 years 1 months ago
    Fractal Clustering for Microarray Data Analysis
    Download  conferences.computer.org
    DNA microarray experiments generate a substantial amount of information about global gene expression. Gene expression profiles can be represented as points in multi-dimensional sp...
    Lu-Yong Wang, Ammaiappan Balasubramanian, Amit Cha...
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    BMCBI
    2005
    127views more  BMCBI 2005»
    Dynamic modeling of cis-regulatory circuits and gene expression prediction via cross-gene identification
    13 years 7 months ago
    Dynamic modeling of cis-regulatory circuits and gene expression prediction via cross-gene identification
    Download  www.biomedcentral.com
    Background: Gene expression programs depend on recognition of cis elements in promoter region of target genes by transcription factors (TFs), but how TFs regulate gene expression ...
    Li-Hsieh Lin, Hsiao-Ching Lee, Wen-Hsiung Li, Bor-...
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