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» Gene Level Concurrency in Genetic Algorithms
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ACMSE
2006
ACM
14 years 1 months ago
Automatic quality assessment of Affymetrix GeneChip data
Computing reliable gene expression levels from microarray experiments is a sophisticated process with many potential pitfalls. Quality control is one of the most important steps i...
Steffen Heber, Beate Sick
BMCBI
2010
167views more  BMCBI 2010»
13 years 7 months ago
Inference of sparse combinatorial-control networks from gene-expression data: a message passing approach
Background: Transcriptional gene regulation is one of the most important mechanisms in controlling many essential cellular processes, including cell development, cell-cycle contro...
Marc Bailly-Bechet, Alfredo Braunstein, Andrea Pag...
BMCBI
2010
178views more  BMCBI 2010»
13 years 7 months ago
Selecting high-dimensional mixed graphical models using minimal AIC or BIC forests
Background: Chow and Liu showed that the maximum likelihood tree for multivariate discrete distributions may be found using a maximum weight spanning tree algorithm, for example K...
David Edwards, Gabriel C. G. de Abreu, Rodrigo Lab...
CONCURRENCY
2000
133views more  CONCURRENCY 2000»
13 years 7 months ago
OpenMP versus threading in C/C++
When comparing OpenMP to other parallel programming models, it is easier to choose between OpenMP and MPI than between OpenMP and POSIX Threads (Pthreads). With languages like C a...
Bob Kuhn, Paul Petersen, Eamonn O'Toole
BMCBI
2007
111views more  BMCBI 2007»
13 years 7 months ago
MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs
Background: A combination of multiple types of transcription factors and cis-regulatory elements is often required for gene expression in eukaryotes, and the combinatorial regulat...
Mamoru Kato, Tatsuhiko Tsunoda