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BMCBI
2006
171views more  BMCBI 2006»
13 years 7 months ago
The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies
Background: Intensity values measured by Affymetrix microarrays have to be both normalized, to be able to compare different microarrays by removing non-biological variation, and s...
Roel G. W. Verhaak, Frank J. T. Staal, Peter J. M....
EVOW
2006
Springer
13 years 11 months ago
A Hybrid GA/SVM Approach for Gene Selection and Classification of Microarray Data
We propose a Genetic Algorithm (GA) approach combined with Support Vector Machines (SVM) for the classification of high dimensional Microarray data. This approach is associated to ...
Edmundo Bonilla Huerta, Béatrice Duval, Jin...
BMCBI
2006
181views more  BMCBI 2006»
13 years 7 months ago
Array2BIO: from microarray expression data to functional annotation of co-regulated genes
Background: There are several isolated tools for partial analysis of microarray expression data. To provide an integrative, easy-to-use and automated toolkit for the analysis of A...
Gabriela G. Loots, Patrick S. G. Chain, Shalini Ma...
AIME
2009
Springer
13 years 11 months ago
Effect of Background Correction on Cancer Classification with Gene Expression Data
This paper empirically compares six background correction methods aimed at removing unspecific background noise of the overall signal level measured by a scanner across microarrays...
Adelaide Freitas, Gladys Castillo, Ana São ...
BMCBI
2006
154views more  BMCBI 2006»
13 years 7 months ago
An improved procedure for gene selection from microarray experiments using false discovery rate criterion
Background: A large number of genes usually show differential expressions in a microarray experiment with two types of tissues, and the p-values of a proper statistical test are o...
James J. Yang, Mark C. K. Yang