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» Gene and protein nomenclature in public databases
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NAR
2008
103views more  NAR 2008»
13 years 7 months ago
DBD--taxonomically broad transcription factor predictions: new content and functionality
DNA-binding domain (DBD) is a database of predicted sequence-specific DNA-binding transcription factors (TFs) for all publicly available proteomes. The proteomes have increased fr...
Derek Wilson, Varodom Charoensawan, Sarah K. Kumme...
BMCBI
2006
128views more  BMCBI 2006»
13 years 8 months ago
Construction of a nasopharyngeal carcinoma 2D/MS repository with Open Source XML Database - Xindice
Background: Many proteomics initiatives require integration of all information with uniformcriteria from collection of samples and data display to publication of experimental resu...
Feng Li, Maoyu Li, Zhiqiang Xiao, Pengfei Zhang, J...
BMCBI
2007
137views more  BMCBI 2007»
13 years 8 months ago
PlnTFDB: an integrative plant transcription factor database
Background: Transcription factors (TFs) are key regulatory proteins that enhance or repress the transcriptional rate of their target genes by binding to specific promoter regions ...
Diego Mauricio Riaño-Pachón, Sloboda...
NAR
2007
155views more  NAR 2007»
13 years 7 months ago
Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
Frequent outbreaks of highly pathogenic avian influenza and the increasing data available for comparative analysis require a central database specialized in influenza viruses (IVs...
Suhua Chang, Jiajie Zhang, Xiaoyun Liao, Xinxing Z...
BMCBI
2008
112views more  BMCBI 2008»
13 years 8 months ago
GlycomeDB - integration of open-access carbohydrate structure databases
Background: Although carbohydrates are the third major class of biological macromolecules, after proteins and DNA, there is neither a comprehensive database for carbohydrate struc...
René Ranzinger, Stephan Herget, Thomas Wett...