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IJBRA
2008
98views more  IJBRA 2008»
13 years 7 months ago
Computationally Optimised DNA Assembly of synthetic genes
: Gene synthesis is hampered by two obstacles:
Liza S. Z. Larsen, Christopher D. Wassman, G. Wesl...
CPM
2005
Springer
97views Combinatorics» more  CPM 2005»
14 years 27 days ago
On the Complexity of Sparse Exon Assembly
Gene structure prediction is one of the most important problems in computational molecular biology. It involves two steps: the first is finding the evidence (e.g. predicting spl...
Carmel Kent, Gad M. Landau, Michal Ziv-Ukelson
BMCBI
2007
151views more  BMCBI 2007»
13 years 7 months ago
Minimus: a fast, lightweight genome assembler
Background: Genome assemblers have grown very large and complex in response to the need for algorithms to handle the challenges of large whole-genome sequencing projects. Many of ...
Daniel D. Sommer, Arthur L. Delcher, Steven L. Sal...
BIRTHDAY
2004
Springer
14 years 23 days ago
Formal Properties of Gene Assembly: Equivalence Problem for Overlap Graphs
del based on (overlap) graphs. The latter is more abstract because the translation of legal strings into overlap graphs is not injective. In this paper we consider and solve the ov...
Tero Harju, Ion Petre, Grzegorz Rozenberg
UC
2007
Springer
14 years 1 months ago
Computing Through Gene Assembly
Tseren-Onolt Ishdorj, Ion Petre