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» Gene function prediction using labeled and unlabeled data
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BMCBI
2006
180views more  BMCBI 2006»
13 years 9 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
BMCBI
2010
99views more  BMCBI 2010»
13 years 10 months ago
Different effects of the probe summarization algorithms PLIER and RMA on high-level analysis of Affymetrix exon arrays
Background: Alternative splicing is an important mechanism that increases protein diversity and functionality in higher eukaryotes. Affymetrix exon arrays are a commercialized pla...
Yi Qu, Fei He, Yuchen Chen
BMCBI
2007
127views more  BMCBI 2007»
13 years 9 months ago
CORRIE: enzyme sequence annotation with confidence estimates
Using a previously developed automated method for enzyme annotation, we report the reannotation of the ENZYME database and the analysis of local error rates per class. In control ...
Benjamin Audit, Emmanuel D. Levy, Walter R. Gilks,...
ICCV
2007
IEEE
14 years 11 months ago
Active Learning with Gaussian Processes for Object Categorization
Discriminative methods for visual object category recognition are typically non-probabilistic, predicting class labels but not directly providing an estimate of uncertainty. Gauss...
Ashish Kapoor, Kristen Grauman, Raquel Urtasun, Tr...
NAR
2006
85views more  NAR 2006»
13 years 9 months ago
WormBase: better software, richer content
WormBase (http://wormbase.org), the public database for genomics and biology of Caenorhabditis elegans, has been restructured for stronger performance and expanded for richer biol...
Erich M. Schwarz, Igor Antoshechkin, Carol Bastian...