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» Gene set analysis for longitudinal gene expression data
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BMCBI
2007
97views more  BMCBI 2007»
13 years 9 months ago
A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, hu
Background: The Affymetrix GeneChip technology uses multiple probes per gene to measure its expression level. Individual probe signals can vary widely, which hampers proper interp...
Rudi Alberts, Peter Terpstra, Menno Hardonk, Leoni...
DIS
2006
Springer
14 years 13 days ago
On Class Visualisation for High Dimensional Data: Exploring Scientific Data Sets
Parametric Embedding (PE) has recently been proposed as a general-purpose algorithm for class visualisation. It takes class posteriors produced by a mixture-based clustering algori...
Ata Kabán, Jianyong Sun, Somak Raychaudhury...
EDBT
2008
ACM
178views Database» more  EDBT 2008»
14 years 9 months ago
An inductive database and query language in the relational model
In the demonstration, we will present the concepts and an implementation of an inductive database ? as proposed by Imielinski and Mannila ? in the relational model. The goal is to...
Lothar Richter, Jörg Wicker, Kristina Kessler...
BMCBI
2006
123views more  BMCBI 2006»
13 years 8 months ago
Permutation test for periodicity in short time series data
Background: Periodic processes, such as the circadian rhythm, are important factors modulating and coordinating transcription of genes governing key metabolic pathways. Theoretica...
Andrey A. Ptitsyn, Sanjin Zvonic, Jeffrey M. Gimbl...
BMCBI
2005
110views more  BMCBI 2005»
13 years 8 months ago
ProGenExpress: Visualization of quantitative data on prokaryotic genomes
Background: The integration of genomic information with quantitative experimental data is a key component of systems biology. An increasing number of microbial genomes are being s...
Michael Watson