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BMCBI
2008
121views more  BMCBI 2008»
13 years 11 months ago
Microarray data mining using landmark gene-guided clustering
Background: Clustering is a popular data exploration technique widely used in microarray data analysis. Most conventional clustering algorithms, however, generate only one set of ...
Pankaj Chopra, Jaewoo Kang, Jiong Yang, HyungJun C...
BMCBI
2006
112views more  BMCBI 2006»
13 years 10 months ago
Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data
Background: Gene expression microarray experiments are expensive to conduct and guidelines for acceptable quality control at intermediate steps before and after the samples are hy...
Lesley Jones, Darlene R. Goldstein, Gareth P. Hugh...
ICS
2005
Tsinghua U.
14 years 4 months ago
What is worth learning from parallel workloads?: a user and session based analysis
Learning useful and predictable features from past workloads and exploiting them well is a major source of improvement in many operating system problems. We review known parallel ...
Julia Zilber, Ofer Amit, David Talby
BMCBI
2006
127views more  BMCBI 2006»
13 years 10 months ago
A graph-search framework for associating gene identifiers with documents
Background: One step in the model organism database curation process is to find, for each article, the identifier of every gene discussed in the article. We consider a relaxation ...
William W. Cohen, Einat Minkov
APBC
2004
122views Bioinformatics» more  APBC 2004»
14 years 5 days ago
Evolution of Relative Synonymous Codon Usage in Human Immunodeficiency Virus Type 1
Mutation in HIV-1 is extremely rapid, a consequence of a low-fidelity viral reverse transcription process. The envelope gene has been shown to accumulate substitutions at a rate o...
Peter L. Meintjes, Allen G. Rodrigo