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» Gene set analysis using principal components
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IFM
2010
Springer
142views Formal Methods» more  IFM 2010»
15 years 2 months ago
An Event-B Approach to Data Sharing Agreements
A Data Sharing Agreement (DSA) is a contract among two or more principals regulating how they share data. Agreements are usually represented as a set of clauses expressed using the...
Alvaro E. Arenas, Benjamin Aziz, Juan Bicarregui, ...
BMCBI
2004
111views more  BMCBI 2004»
15 years 3 months ago
Multiclass discovery in array data
Background: A routine goal in the analysis of microarray data is to identify genes with expression levels that correlate with known classes of experiments. In a growing number of ...
Yingchun Liu, Markus Ringnér
BMCBI
2004
154views more  BMCBI 2004»
15 years 3 months ago
Base-By-Base: Single nucleotide-level analysis of whole viral genome alignments
Background: With ever increasing numbers of closely related virus genomes being sequenced, it has become desirable to be able to compare two genomes at a level more detailed than ...
Ryan Brodie, Alex J. Smith, Rachel L. Roper, Vasil...
SGP
2004
15 years 6 months ago
Shape Segmentation Using Local Slippage Analysis
We propose a method for segmentation of 3D scanned shapes into simple geometric parts. Given an input point cloud, our method computes a set of components which possess one or mor...
Natasha Gelfand, Leonidas J. Guibas
BMCBI
2008
159views more  BMCBI 2008»
15 years 3 months ago
Estimation and testing for the effect of a genetic pathway on a disease outcome using logistic kernel machine regression via log
Background: Growing interest on biological pathways has called for new statistical methods for modeling and testing a genetic pathway effect on a health outcome. The fact that gen...
Dawei Liu, Debashis Ghosh, Xihong Lin