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» General Loss Bounds for Universal Sequence Prediction
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BMCBI
2008
147views more  BMCBI 2008»
13 years 7 months ago
Transmembrane helix prediction using amino acid property features and latent semantic analysis
Background: Prediction of transmembrane (TM) helices by statistical methods suffers from lack of sufficient training data. Current best methods use hundreds or even thousands of f...
Madhavi Ganapathiraju, Narayanas Balakrishnan, Raj...
BMCBI
2007
157views more  BMCBI 2007»
13 years 7 months ago
Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory
Background: Large-scale sequencing of entire genomes has ushered in a new age in biology. One of the next grand challenges is to dissect the cellular networks consisting of many i...
Feng Luo, Yunfeng Yang, Jianxin Zhong, Haichun Gao...
CIKM
2009
Springer
14 years 2 hour ago
Heterogeneous cross domain ranking in latent space
Traditional ranking mainly focuses on one type of data source, and effective modeling still relies on a sufficiently large number of labeled or supervised examples. However, in m...
Bo Wang, Jie Tang, Wei Fan, Songcan Chen, Zi Yang,...
SWAT
2004
Springer
98views Algorithms» more  SWAT 2004»
14 years 21 days ago
Tight Approximability Results for Test Set Problems in Bioinformatics
In this paper, we investigate the test set problem and its variations that appear in a variety of applications. In general, we are given a universe of objects to be “distinguish...
Piotr Berman, Bhaskar DasGupta, Ming-Yang Kao
SMA
2003
ACM
123views Solid Modeling» more  SMA 2003»
14 years 18 days ago
Collision prediction for polyhedra under screw motions
The prediction of collisions amongst N rigid objects may be reduced to a series of computations of the time to first contact for all pairs of objects. Simple enclosing bounds and...
ByungMoon Kim, Jarek Rossignac