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BMCBI
2007
153views more  BMCBI 2007»
13 years 7 months ago
A new pairwise kernel for biological network inference with support vector machines
Background: Much recent work in bioinformatics has focused on the inference of various types of biological networks, representing gene regulation, metabolic processes, protein-pro...
Jean-Philippe Vert, Jian Qiu, William Stafford Nob...
IPPS
2008
IEEE
14 years 2 months ago
Adaptive Locality-Effective Kernel Machine for protein phosphorylation site prediction
In this study, we propose a new machine learning model namely, Adaptive Locality-Effective Kernel Machine (Adaptive-LEKM) for protein phosphorylation site prediction. Adaptive-LEK...
Paul D. Yoo, Yung Shwen Ho, Bing Bing Zhou, Albert...
ICANN
2005
Springer
14 years 1 months ago
Smooth Bayesian Kernel Machines
Abstract. In this paper, we consider the possibility of obtaining a kernel machine that is sparse in feature space and smooth in output space. Smooth in output space implies that t...
Rutger W. ter Borg, Léon J. M. Rothkrantz
NIPS
2004
13 years 9 months ago
Efficient Kernel Machines Using the Improved Fast Gauss Transform
The computation and memory required for kernel machines with N training samples is at least O(N2 ). Such a complexity is significant even for moderate size problems and is prohibi...
Changjiang Yang, Ramani Duraiswami, Larry S. Davis
ICPR
2006
IEEE
14 years 8 months ago
On Kernel Selection in Relevance Vector Machines Using Stability Principle
In this paper we propose an alternative interpretation of Bayesian learning based on maximal evidence principle. We establish a notion of local evidence which can be viewed as a c...
Dmitry Kropotov, Nikita Ptashko, Oleg Vasiliev, Dm...